4 vs 4 samples: padj < 0.05: mean 234 genes, share with true change below 2-fold 29.5%, genes truly above 2-fold found 96.4%; padj < 0.05 and |LFC| > 1 after testing: mean 167 genes, share with true change below 2-fold 6.4%, genes truly above 2-fold found 91.5%; TREAT |LFC| > 1, adjusted p < 0.05: mean 42 genes, share with true change below 2-fold 0.0%, genes truly above 2-fold found 24.8%
8 vs 8 samples: padj < 0.05: mean 287 genes, share with true change below 2-fold 40.4%, genes truly above 2-fold found 100.0%; padj < 0.05 and |LFC| > 1 after testing: mean 171 genes, share with true change below 2-fold 4.9%, genes truly above 2-fold found 95.3%; TREAT |LFC| > 1, adjusted p < 0.05: mean 104 genes, share with true change below 2-fold 0.0%, genes truly above 2-fold found 60.8%