Prepare dataLimits and conditions

Data preparation:limits and conditions.

Which preparation steps are supported, which are deliberately excluded, and what the checks cannot establish.

Steps it does not perform

No imputation or automatic exclusion
Missing values are not filled in, and outliers are not removed automatically.
No normalization or batch correction
General normalization and batch correction are not performed. Bulk RNA-seq uses its own fixed processing profile; see Supported analyses.
No automatic aggregation or guessed joins
Technical replicates are not averaged automatically, and ambiguous IDs are never matched by guesswork.

Supported inputs

Formats
CSV and JSON. Joining combines one measurement table with one sample-information table through a one-to-one ID key.
Numbers
Values must be plain finite decimals: no exponent notation, at most 40 characters, and either zero or between 10⁻¹² and 10⁶ in magnitude.
Unit conversion
One adopted same-dimension conversion with a fixed factor. Conversions that change dimension are refused.
Equipment-failure records
One type of outcome-independent equipment failure in a two-independent-group study analyzed with Student’s t-test. That the failure was unrelated to the outcome is your declaration, not something SciGround proves; if it is unknown, only limited results are saved. General missing data, deaths, detection limits, and outcome-dependent quality control are out of scope.
Accepted data
Data you have the right to use, that are not identifiable or re-identifiable, and that are not clinical. See Data and security.

What the checks cannot establish

Who sent a file
SciGround confirms the bytes it received, not who sent them. Keeping uploads to researchers depends on how you assign roles.
Measurement truth
A clean quality report does not prove that the instrument measured correctly or that samples were labeled correctly at the bench.
Recovered values
Analysis with missing values describes the observed data under stated conditions. It does not recover what the missing measurements would have been.
History
Tidying data does not make an analysis pre-specified or a later correction eligible.